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The Fort Wayne Indian Agency collection consists of a letterbook kept by Indian agents John Johnston and Benjamin Franklin Stickney; an English-to-Ottawa dictionary, likely written by Stickney; and a memorandum book kept by Johnston during his time at Fort Wayne.

The Fort Wayne Indian Agency collection consists of a letterbook kept by Indian agents John Johnston and Benjamin Franklin Stickney; an English to Ottawa dictionary, likely written by Stickney; and a memorandum book kept by Johnston during his time at Fort Wayne.

The Fort Wayne Indian Agency Letter book (189 pages) was compiled by agents John Johnston (April 15, 1809-November 30, 1811) and Benjamin F. Stickney (April 18, 1812-October 1, 1815), who documented all accounts, disputes, complaints, and other occurrences that transpired between the soldiers at the fort and the Native Americans. The letterbook records the agency business during the critical years before and during the War of 1812, when Fort Wayne was a vital part of American frontier defenses. The volume is comprised of copies of letters, speeches, circulars, and documents, to and from the agents and various departments of the United States government. The correspondents include Presidents Jefferson and Madison; Secretary of State James Monroe, Secretaries of War Henry Dearborn, John Armstrong, and William H. Crawford; the governor of Indiana Territory, William Henry Harrison; and Michigan governors William Hull and Lewis Cass; as well as several Indian chiefs (listed in Additional Descriptive Data). The entries contain lists of supplies received at Fort Wayne, lists of supplies and gifts extended to the Indians, receipts for work done at the garrison, reports on Indian activities, speeches addressed to the Indians, accounts of the war on the frontier, and reports about other conflicts in the area. The volume concludes with a 13-page "statements and observations relating to the Indian department" which summarizes Stickney's efforts during the War of 1812. For a complete transcription of the letterbook, along with a thorough index, see:

Thornbrough, Gayle. Letter Book of the Indian Agency At Fort Wayne, 1809-1815. Indianapolis: Indiana Historical Society, 1961.

The English to Ottawa dictionary (40 pages) contains phonetic spellings for English words in the language of the Ottawa Indians (the Ottawa speak a dialect of Ojibwe). The book, likely composed by Stickney, contains words for mammals, fowl, birds, fish, reptiles, elements (earth, water, wood, stone, clay, etc.) plants, trees, body parts and facial features, food, maladies, medicine, feelings (love, malice, envy etc.), celestial features, weather, clothes and other goods, numbers, colors, and useful phrases. In addition to providing information on the Ottawan language, the dictionary relates concepts and terms that were important to the Americans. This volume was likely never published.

John Johnston kept the Fort Wayne memorandum book (145 pages) during his tenure as Indian agent at Fort Wayne, from 1802-1811. The volume contains both personal and official material. The first entry was March 20, 1801, when Johnson was appointed by General Henry Dearborn to be a clerk in the War Department. He arrived at Fort Wayne on September 20, 1802. The volume contains several lists of supplies for Fort Wayne and for gifts to the Indians, and records bills and accounts from the Indian agency and the War Department. Many of the accounts concern Indian agent William Wells (1802-1803). Johnston also made notes on his daily responsibilities, of enquiries into food and supplies, and on people traveling to and from Fort Wayne and Washington D.C.; Dayton, Ohio; and Detroit, Michigan. Several entries relate to Native Americans, and discuss Little Turtle's adopted son and the husband of Little Turtle's daughter. Among Johnston's personal notes are financial records for planting his farm and orchard in 1808. The memorandum book provides information about life in the Indiana Territory in the early 19th century.

The Thomas Flournoy papers consist of letters, documents, and receipts of Flournoy, a lawyer from Augusta, Georgia, who commanded in the South during the War of 1812. He served as commissioner to the Creek Indians between 1820 and 1836. The collection consists of over 90 letters, around 20 documents, six receipts, and a lock of hair.

The Correspondence series contains around 25 items relating to Flournoy's military and War of 1812 service, including letters, returns, requisitions, reports, orders, and petitions. They cover a range of topics, such as desertions, courts martials, supplies, and appointments. Approximately 20 letters relate to his position as United States commissioner to the Creek Indians (1820).

• Around ten letters pertinent to legal disputes between Flournoy and Judge George Walton, and the resulting duel between Flournoy and the judge's nephew John Carter Walton (1799-1804).
• This series also incorporates around 20 family letters, including three from his nephew Matthew Wells (November 12, 1806, May 12, 1816, and May 4, 1837), one letter and one letter fragment from his brother John James Flournoy, 15 from his brother Matthew Flournoy, and one reply to Matthew his brother. These discuss business, professional favors, death of a son in Fayette, Kentucky, and family news.
• Letter by Thomas H. Cushing to Thomas Flournoy, on receipt of Flournoy's acceptance of the appointment as Brigadier General (July 17, 1812).
• Letter by Col. Jno. Pray to Thomas Flournoy, giving him an evaluation of conditions, strategic issues, and risks at Savannah, Georgia, referencing African Americans (November 3, 1812).
• Draft letter by Thomas Flournoy respecting the removal of Lt. Col. Houston of the 8th Regiment Infantry (commanding at Savannah) as a result of "mental derangement, which disqualifies him for command." Suspended until further order (November 16, 1812).
• Four official letters between Flournoy and Patrick Jack, colonel of the 8th Regiment of U.S. Infantry (1812).
• A letter from William Harris Crawford, the U.S. minister to France, concerning the management and politics of the war (November 30, 1812).
• A letter from John Houstoun McIntosh, director of the Territory of East Florida, concerning the settlers of Talbot Island and Nassau River, East Florida (December 26, 1812).
• An inspection return from the 3rd Regiment of Georgia militia at Point Peter Battery, Florida [January 9, 1813].
• A copy of Brigadier General Ferdinand Leigh Claiborne's "Talk to the Choctaw Indians" (August 2, 1813).
• A letter from Choctaw Chief Pushmataha (Pooshemataha), signed with his mark, to James Wilkinson, discussing murdered and imprisoned Choctaw Indians (August 9, 1813).
• Three letters between Flournoy and Former South Carolina Governor and Creek Indian negotiator Andrew Pickins, Jr., concerning treaties with the Creek Indians (August 21, 28, and October 30, 1820).
• Three items to and from John C. Calhoun of the War Department.
• Letter from William H. Crawford to Thomas Flournoy, on Georgia and Kentucky politics. "The present governor admits of nothing like neutrality. Whoever is not devoted to him is considered his enemy." (October 2, 1820).
• Nine letters with David Brydie Mitchell, including a communication from Tustunnuggee Thlocco (Tiger Tail) and Tustunnuggee Hopoie (November 10, 1820).
• A letter to John Clarke of Augusta, Georgia, concerning claims of Georgia residents for Creek lands (October 4, 1820).
• An eight page letter from Thomas Flournoy to Rev. Dr. Davies pertains to Flournoy's responses to a sermon sent by Davies. He noted that he asked Judge Longstreet questions about scripture, naming 1 Corinthians 15 in particular, and that Longstreet apparently discussed it in church. An indirect source told Flournoy that he "asked a number of Infidel questions of Longstreet, which he refused to answer" (April 27, 1840).
• A letter from Flournoy's nephew, Thomas C. Flournoy, includes content on Kentucky land business and politics. He praised the oratory skills of Senator Corwin of Ohio (May 17, 1849).

The Documents series (20 items) consists of a list of rules for the duel between Flournoy and Walton (1804); general orders appointing Thomas Flournoy as aide de camp to the Commander in Chief, with rank of Lieutenant Colonel (April 6, 1804); reports on the arms, ammunition, and crew of the gun vessels at the Georgia Station (1813); weekly reports and morning reports of the troops stationed at Fort St. Philip, Fort St. Charles, New Orleans, and for the 2nd Regiment of Light Dragoons; orders from the Southern Department; a transaction record at the Bank of Augusta; and a memo listing "Order of Correspondence relating to the Treaty with the Creek Indians" (1820); and the last will and testament of Thomas Flournoy (July 20, 1856).

The Receipts series (6 items) is comprised of receipts deposited in the Bank of Augusta, Georgia; 2 payments made to John Campbell; and 2 receipts for sugar and brandy.

The papers also include a lock of Thomas Flournoy's Hair, clipped when he was 46 years old.